Peppers are a popular food grown around the world for their vibrant and delicious fruits. Many people are familiar with the sweet or spicy flavors of peppers, but sometimes you may find your peppers are looking less than fresh due to holes in their flesh.
Holes in your peppers are typically due to infestation by pests such as insects, and while this doesn’t always result in the entire fruit becoming inedible, it’s worth proceeding with caution and cutting the pepper open carefully to inspect the damage throughout. If the pepper has changed color inside, it may no longer be safe to consume.
In this article, we’ll be looking at the conditions that can lead to the holes in a pepper, how you can best limit their presence, and at what point it might be better to simply throw the whole item away. This should put you in a great position to minimize food waste and save money, without risking getting ill.
Why Do My Peppers Have Holes?

A few things can cause holes in peppers, such as damage during transportation. However, the likeliest cause of holes is insect damage, which usually occurs while the peppers are still growing on the plant. If you grow your own peppers at home, you might see this.
It’s rare to see it in store-bought peppers as they tend to be removed from sale, but you might occasionally find a holey pepper.
If you are growing your own peppers, you need to know what insects you are trying to defend your crop from. Unfortunately, there are many pests that are partial to peppers, but some of the most common ones are:
- Slugs
- Snails
- Aphids
- Spider mites
- Grasshoppers
- Fruit worms
- Thrips
- Pepper maggots
- Armyworms, which could be either the beet or the yellow striped variety
You may be able to prevent these pests from causing holes in your peppers, which we will cover in a later section.
Is It Okay To Eat Peppers With Holes In Them?
While it may be off-putting to know that your food has had others nibbling at it too, it may not matter in some cases. This depends on the severity of the infestation and how much damage has been done. Often, you can cut out the part the insects have chewed and discard it, leaving the rest of the flesh safe to consume. This isn’t always the case, however.
In some cases, a pepper that has been chewed by insects will not be safe to eat. This usually happens if the insects have made large holes that have allowed flies to lay eggs inside the peppers. These insects will also produce waste that contaminates the vegetable and makes it unsafe to eat.
You will therefore need to inspect a pepper carefully before you decide whether to consume it or not. If the holes are small and the damage is minimal, slice off that part of the vegetable and remove some of the good flesh as well, creating a “safe zone” between the contaminated part and the part of the vegetable that you will use.
However, if the pepper has turned brown inside, or if parts of it are squishy and have a strange odor, it is safer to throw the pepper away. Eating it could lead to food poisoning, which can result in diarrhea, vomiting, nausea, and feverishness. You must therefore treat damaged peppers with caution. If in doubt, compost the pepper.
How Can I Prevent Pests From Eating My Peppers?
There are a range of tactics available to keep your peppers protected from grubs. These include:
- Covering the plants, which may help to protect them from flying pests like grasshoppers
- Using various insecticides or pesticides, or natural remedies such as soap and water, to get rid of pests when they land on the plants
- Using copper tape around the containers or beds, which will help to deter snails and slugs
It’s best to take some time to figure out specifically what is eating your pepper so you can tailor the solution to the pest. Inspect your peppers every few days and look for signs of damage on the fruits or leaves. If you see insects on the plant, examine them so you can determine if they are a threat to the pepper or not.
You can often tell what’s attacking your peppers by what sort of damage is present. For example, thrips are a common plant predator, and they will leave scarring on the surface of the pepper. This may be whitish-brown or just brown, and it will grow as the fruit grows.
Alternatively, if you see dents or craters in the fruit, you may be dealing with pepper maggots. These make indentations when they lay eggs just below the skin of the pepper.Figuring out what is eating your peppers will let you take appropriate steps to protect them.
When Should I Throw The Pepper Away?
It can often be hard to tell exactly when something is past the point of saving, and peppers are no exception to this.
A good way to check is to see what proportion of the flesh has been marked by the pests. If it’s just a small external patch and there are no signs of any internal effects then it may be safe to remove and dispose of that particular section
However, if there’s heavy marking or actual holes that lead into the inside of the fruit, it’s probably best to just compost the whole pepper. Check for other signs of decay, such as a strange smell, squishiness, moisture leakage, or an odd taste.
Conclusion
Holey peppers are sometimes safe to eat, but only if the damage is minor. If the pepper has significant holes in it or there are other signs of spoilage, you will need to compost the vegetable rather than eat it. If there is just a little bit of surface damage, cut away the affected part and the rest should be perfectly safe to eat.